mmtfPyspark.webfilters.wildTypeQuery module

wildType.py

This filter returns entries that contain wild type protein chains. polymer chain(s) made of L-amino acids. If the “exclusive” flag is set to true in the constructor, all polymer chains must be L-proteins. For a multi-model structure, this filter only checks the first model.

class WildTypeQuery(includeExpressionTags, percentSequenceCoverage=None)[source]

Bases: object

Methods

__call__(t) Call self as a function.
SEQUENCE_COVERAGE_100 = 100
SEQUENCE_COVERAGE_60 = 60
SEQUENCE_COVERAGE_65 = 65
SEQUENCE_COVERAGE_70 = 70
SEQUENCE_COVERAGE_75 = 75
SEQUENCE_COVERAGE_80 = 80
SEQUENCE_COVERAGE_85 = 85
SEQUENCE_COVERAGE_90 = 90
SEQUENCE_COVERAGE_95 = 95