pisces.py
This filter passes through representative structures or protein chains from the PISCES CulledPDB sets. A CulledPDB set is selected by specifying sequenceIdentity and resolution cutoff values from the following list: - sequenceIdentity = [20, 25, 30, 40, 50, 60, 70, 80, 90] - resolution = [1.6, 1.8, 2.0, 2.2, 2.5, 3.0]
Pisces
(sequenceIdentity, resolution)[source]¶Bases: object
Filters representative PDB structures and polymer chains based on the specified criteria using PISCES CulledPDB sets.
sequenceIdentity = 20, 25, 30, 40, 50, 60, 70, 80, 90 resolution = 1.6, 1.8, 2.0, 2.2, 2.5, 3.0
Attributes
sequenceIdentity | (int) sequence identity cutoff values |
resolution | (float) resolution cutoff value |
Methods
__call__ (t) |
Call self as a function. |